gettimeofday() will probably do what you want.
If you're on Intel hardware, here's how to read the CPU real-time instruction counter. It will tell you the number of CPU cycles executed since the processor was booted. This is probably the finest-grained, lowest overhead counter you can get for performance measurement.
Note that this is the number of CPU cycles. On linux you can get the CPU speed from /proc/cpuinfo and divide to get the number of seconds. Converting this to a double is quite handy.
When I run this on my box, I get
11867927879484732 11867927879692217 it took this long to call printf: 207485
Here's the Intel developer's guide that gives tons of detail.
#include <stdio.h>
#include <stdint.h>
inline uint64_t rdtsc() {
uint32_t lo, hi;
__asm__ __volatile__ (
"xorl %%eax, %%eax\n"
"cpuid\n"
"rdtsc\n"
: "=a" (lo), "=d" (hi)
:
: "%ebx", "%ecx");
return (uint64_t)hi << 32 | lo;
}
main()
{
unsigned long long x;
unsigned long long y;
x = rdtsc();
printf("%lld\n",x);
y = rdtsc();
printf("%lld\n",y);
printf("it took this long to call printf: %lld\n",y-x);
}