How can I search sub-folders using glob glob module

Question

I want to open a series of subfolders in a folder and find some text files and print some lines of the text files  I am using this   configfiles   glob glob  C  Users sam Desktop file1   txt     But this cannot access the subfolders as well  Does anyone know how I can use the same command to access subfolders as well

User · Accepted Answer

In Python 3 5 and newer use the new recursive     functionality   configfiles   glob glob  C  Users sam Desktop file1      txt   recursive True    When recursive is set     followed by a path separator matches 0 or more subdirectories    In earlier Python versions  glob glob   cannot list files in subdirectories recursively   In that case I d use os walk   combined with fnmatch filter   instead   import os import fnmatch  path    C  Users sam Desktop file1   configfiles    os path join dirpath  f      for dirpath  dirnames  files in os walk path      for f in fnmatch filter files     txt      This ll walk your directories recursively and return all absolute pathnames to matching  txt files  In this specific case the fnmatch filter   may be overkill  you could also use a  endswith   test   import os  path    C  Users sam Desktop file1   configfiles    os path join dirpath  f      for dirpath  dirnames  files in os walk path      for f in files if f endswith   txt

User · Answer

You can use the function glob glob   or glob iglob   directly from glob module to retrieve paths recursively from inside the directories files and subdirectories subfiles  Syntax  glob glob pathname     recursive False    pathname     path to the directory  or subdirectory glob iglob pathname     recursive False   In your example  it is possible to write like this   import glob import os  configfiles    f for f in glob glob  quot C  Users sam Desktop   txt quot     for f in configfiles      print f Filename with path   f        print f Only filename   os path basename f         print f Filename without extensions   os path splitext os path basename f   0      Output  Filename with path  C  Users sam Desktop test file txt Only filename  test file txt Filename without extensions  test file  Help  Documentation for os path splitext and documentation for os path basename

User · Answer

The command rglob will do an infinite recursion down the deepest sub-level of your directory structure   If you only want one level deep  then do not use it  however   I realize the OP was talking about using glob glob   I believe this answers the intent  however  which is to search all subfolders recursively   The rglob function recently produced a 100x increase in speed for a data processing algorithm which was using the folder structure as a fixed assumption for the order of data reading   However  with rglob we were able to do a single scan once through all files at or below a specified parent directory  save their names to a list  over a million files   then use that list to determine which files we needed to open at any point in the future based on the file naming conventions only vs  which folder they were in

User · Answer

As pointed out by Martijn  glob can only do this through the   operator introduced in Python 3 5  Since the OP explicitly asked for the glob module  the following will return a lazy evaluation iterator that behaves similarly  import os  glob  itertools  configfiles   itertools chain from iterable glob iglob os path join root    txt                             for root  dirs  files in os walk  C  Users sam Desktop file1       Note that you can only iterate once over configfiles in this approach though  If you require a real list of configfiles that can be used in multiple operations you would have to create this explicitly by using list configfiles

User · Answer

Here is a adapted version that enables glob glob like functionality without using glob2    def find files directory  pattern           if not os path exists directory           raise ValueError  Directory not found     format directory        matches          for root  dirnames  filenames in os walk directory           for filename in filenames              full path   os path join root  filename              if fnmatch filter  full path   pattern                   matches append os path join root  filename       return matches   So if you have the following dir structure  tests files  -- a0         -- a0 txt         -- a0 yaml         -- b0             -- b0 yaml             -- b00 yaml  -- a1   You can do something like this  files   utils find files  tests files      b0 b  yaml    gt    tests files a0 b0 b0 yaml    tests files a0 b0 b00 yaml     Pretty much fnmatch pattern match on the whole filename itself  rather than the filename only

User · Answer

You can use Formic with Python 2 6  import formic fileset   formic FileSet include       txt   directory  C  Users sam Desktop      Disclosure - I am the author of this package

User · Answer

There s a lot of confusion on this topic  Let me see if I can clarify it  Python 3 7     glob glob    txt                     matches all files ending in   txt  in current directory glob glob      txt                   same as 1 glob glob       txt                  matches all files ending in   txt  in the immediate subdirectories only  but not in the current directory glob glob    txt  recursive True     same as 1 glob glob      txt  recursive True   same as 3 glob glob       txt  recursive True  matches all files ending in   txt  in the current directory and in all subdirectories   So it s best to always specify recursive True

User · Answer

If you can install glob2 package         import glob2 filenames   glob2 glob  C   top directory        ext      Where ext is a specific file extension folders   glob2 glob  C   top directory           All filenames and folders    all ff   glob2 glob  C   top directory

User · Answer

To find files in immediate subdirectories   configfiles   glob glob r C  Users sam Desktop     txt     For a recursive version that traverse all subdirectories  you could use    and pass recursive True since Python 3 5   configfiles   glob glob r C  Users sam Desktop      txt   recursive True    Both function calls return lists  You could use glob iglob   to return paths one by one  Or use pathlib   from pathlib import Path  path   Path r C  Users sam Desktop   txt files only subdirs   path glob      txt   txt files all recursively   path rglob    txt     including the current dir   Both methods return iterators  you can get paths one by one

User · Answer

The first options are of course mentioned in other answers  here the goal is to show that glob uses os scandir internally  and provide a direct answer with this    Using glob As explained before  with Python 3 5   it s easy  import glob for f in glob glob  d  temp        recursive True       print f    d  temp New folder  d  temp New Text Document - Copy txt  d  temp New folder New Text Document - Copy txt  d  temp New folder New Text Document txt  Using pathlib from pathlib import Path for f in Path  d  temp   glob              print f   Using os scandir os scandir is what glob does internally  So here is how to do it directly  with a use of yield  def listpath path       for f in os scandir path           f2   os path join path  f          if os path isdir f               yield f2             yield from listpath f2          else              yield f2  for f in listpath  d   temp        print f

User · Answer

configfiles   glob glob  C  Users sam Desktop      txt     Doesn t works for all cases  instead use glob2    configfiles   glob2 glob  C  Users sam Desktop      txt

User · Answer

If you re running Python 3 4   you can use the pathlib module  The Path glob   method supports the    pattern  which means    this directory and all subdirectories  recursively     It returns a generator yielding Path objects for all matching files   from pathlib import Path configfiles   Path  C  Users sam Desktop file1    glob       txt

User · Answer

The glob2 package supports wild cards and is reasonably fast  code       import glob2 glob2 glob  files            timeit timeit code  number 1    On my laptop it takes approximately 2 seconds to match  60 000 file paths

[python] How can I search sub-folders using glob.glob module?

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