[python] How can I rename a conda environment?

conda should have given us a simple tool like cond env rename <old> <new> but it hasn't. Simply renaming the directory, as in this previous answer, of course, breaks the hardcoded hashbangs(#!). Hence, we need to go one more level deeper to achieve what we want.

conda env list
# conda environments:
#
base                  *  /home/tgowda/miniconda3
junkdetect               /home/tgowda/miniconda3/envs/junkdetect
rtg                      /home/tgowda/miniconda3/envs/rtg

Here I am trying to rename rtg --> unsup (please bear with those names, this is my real use case)

$ cd /home/tgowda/miniconda3/envs 
$ OLD=rtg
$ NEW=unsup
$ mv $OLD $NEW   # rename dir

$ conda env list
# conda environments:
#
base                  *  /home/tgowda/miniconda3
junkdetect               /home/tgowda/miniconda3/envs/junkdetect
unsup                    /home/tgowda/miniconda3/envs/unsup


$ conda activate $NEW
$ which python
  /home/tgowda/miniconda3/envs/unsup/bin/python

the previous answer reported upto this, but wait, we are not done yet! the pending task is, $NEW/bin dir has a bunch of executable scripts with hashbangs (#!) pointing to the $OLD env paths.

See jupyter, for example:

$ which jupyter
/home/tgowda/miniconda3/envs/unsup/bin/jupyter

$ head -1 $(which jupyter) # its hashbang is still looking at old
#!/home/tgowda/miniconda3/envs/rtg/bin/python

So, we can easily fix it with a sed

$ sed  -i.bak "s:envs/$OLD/bin:envs/$NEW/bin:" $NEW/bin/*  
# `-i.bak` created backups, to be safe

$ head -1 $(which jupyter) # check if updated
#!/home/tgowda/miniconda3/envs/unsup/bin/python
$ jupyter --version # check if it works
jupyter core     : 4.6.3
jupyter-notebook : 6.0.3

$ rm $NEW/bin/*.bak  # remove backups

Now we are done

I think it should be trivial to write a portable script to do all those and bind it to conda env rename old new.


I tested this on ubuntu. For whatever unforseen reasons, if things break and you wish to revert the above changes:

$ mv $NEW  $OLD
$ sed  -i.bak "s:envs/$NEW/bin:envs/$OLD/bin:" $OLD/bin/*

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