I recently installed anaconda2 on my Mac. By default Conda is configured to activate the base environment when I open a fresh terminal session.
I want access to the Conda commands (i.e. I want the path to Conda added to my $PATH which Conda does when initialised so that's fine).
But I don't ordinarily program in python, and I don't want Conda to activate an environment by default.
When first executing conda init
from the prompt, Conda adds the following to my .bash_profile
:
# >>> conda initialize >>>
# !! Contents within this block are managed by 'conda init' !!
__conda_setup="$('/Users/geoff/anaconda2/bin/conda' 'shell.bash' 'hook' 2> /dev/null)"
if [ $? -eq 0 ]; then
eval "$__conda_setup"
else
if [ -f "/Users/geoff/anaconda2/etc/profile.d/conda.sh" ]; then
. "/Users/geoff/anaconda2/etc/profile.d/conda.sh"
else
export PATH="/Users/geoff/anaconda2/bin:$PATH"
fi
# fi
unset __conda_setup
# <<< conda initialize <<<
If I comment out the whole block, then I can't activate any Conda environments.
I tried to comment out the whole block except for
export PATH="/Users/geoff/anaconda2/bin:$PATH"
But then when I started a new session and tried to activate an environment, I got this error message:
CommandNotFoundError: Your shell has not been properly configured to use 'conda activate'.
This question (and others like it) are helpful, but doesn't ultimately answer my question and is more suited for linux users.
For clarification, I'm not asking to remove the (base)
from my $PS1
I'm asking for Conda not to activate base when I open a terminal session.
If you want to keep your bashrc simple, you can remove all the conda init
generated clutter, and keep only a single line:
. "/Users/geoff/anaconda2/etc/profile.d/conda.sh"
See Recommended change to enable conda in your shell.
This will make the conda command available without activating the base environment.
If you want to use your bashrc on other systems where conda is not installed in the same path, you can keep the if
/fi
lines as well to avoid error messages, i.e.:
if [ -f "/Users/geoff/anaconda2/etc/profile.d/conda.sh" ]; then
. "/Users/geoff/anaconda2/etc/profile.d/conda.sh"
fi
The answer depends a little bit on the version of conda
that you have installed. For versions of conda >= 4.4, it should be enough to deactivate
the conda environment after the initialization, so add
conda deactivate
right underneath
# <<< conda initialize <<<
I faced the same problem. Initially I deleted the .bash_profile but this is not the right way. After installing anaconda it is showing the instructions clearly for this problem. Please check the image for solution provided by Anaconda
So in the end I found that if I commented out the Conda initialisation block like so:
# >>> conda initialize >>>
# !! Contents within this block are managed by 'conda init' !!
# __conda_setup="$('/Users/geoff/anaconda2/bin/conda' 'shell.bash' 'hook' 2> /dev/null)"
# if [ $? -eq 0 ]; then
# eval "$__conda_setup"
# else
if [ -f "/Users/geoff/anaconda2/etc/profile.d/conda.sh" ]; then
. "/Users/geoff/anaconda2/etc/profile.d/conda.sh"
else
export PATH="/Users/geoff/anaconda2/bin:$PATH"
fi
# fi
# unset __conda_setup
# <<< conda initialize <<<
It works exactly how I want. That is, Conda is available to activate an environment if I want, but doesn't activate by default.
To disable auto activation of conda base environment in terminal:
conda config --set auto_activate_base false
To activate conda base environment:
conda activate
There're 3 ways to achieve this after conda
4.6. (The last method has the highest priority.)
Use sub-command conda config
to change the setting.
conda config --set auto_activate_base false
In fact, the former conda config
sub-command is changing configuration file .condarc
. We can modify .condarc
directly. Add following content into .condarc
under your home directory,
# auto_activate_base (bool)
# Automatically activate the base environment during shell
# initialization. for `conda init`
auto_activate_base: false
Set environment variable CONDA_AUTO_ACTIVATE_BASE
in the shell's init file. (.bashrc
for bash, .zshrc
for zsh)
CONDA_AUTO_ACTIVATE_BASE=false
To convert from the
condarc
file-based configuration parameter name to the environment variable parameter name, make the name all uppercase and prependCONDA_
. For example, conda’salways_yes
configuration parameter can be specified using aCONDA_ALWAYS_YES
environment variable.
The environment settings take precedence over corresponding settings in .condarc
file.
One thing that hasn't been pointed out, is that there is little to no difference between not having an active environment and and activating the base environment, if you just want to run applications from Conda's (Python's) scripts directory (as @DryLabRebel wants).
You can install and uninstall via conda and conda shows the base environment as active - which essentially it is:
> echo $Env:CONDA_DEFAULT_ENV
> conda env list
# conda environments:
#
base * F:\scoop\apps\miniconda3\current
> conda activate
> echo $Env:CONDA_DEFAULT_ENV
base
> conda env list
# conda environments:
#
base * F:\scoop\apps\miniconda3\current
This might be a bug of the recent anaconda. What works for me:
step1: vim /anaconda/bin/activate
, it shows:
#!/bin/sh
_CONDA_ROOT="/anaconda"
# Copyright (C) 2012 Anaconda, Inc
# SPDX-License-Identifier: BSD-3-Clause
\. "$_CONDA_ROOT/etc/profile.d/conda.sh" || return $?
conda activate "$@"
step2: comment out the last line: # conda activate "$@"
Source: Stackoverflow.com