As posted in another answer, the wildcard library works for both glob and regex filename matching: http://code.google.com/p/wildcard/
I used the following code to match glob patterns including absolute and relative on *nix style file systems:
String filePattern = String baseDir = "./";
// If absolute path. TODO handle windows absolute path?
if (filePattern.charAt(0) == File.separatorChar) {
baseDir = File.separator;
filePattern = filePattern.substring(1);
}
Paths paths = new Paths(baseDir, filePattern);
List files = paths.getFiles();
I spent some time trying to get the FileUtils.listFiles methods in the Apache commons io library (see Vladimir's answer) to do this but had no success (I realise now/think it can only handle pattern matching one directory or file at a time).
Additionally, using regex filters (see Fabian's answer) for processing arbitrary user supplied absolute type glob patterns without searching the entire file system would require some preprocessing of the supplied glob to determine the largest non-regex/glob prefix.
Of course, Java 7 may handle the requested functionality nicely, but unfortunately I'm stuck with Java 6 for now. The library is relatively minuscule at 13.5kb in size.
Note to the reviewers: I attempted to add the above to the existing answer mentioning this library but the edit was rejected. I don't have enough rep to add this as a comment either. Isn't there a better way...