What Thomas has written is correct, in addition to that, if you want to initialize multiple schemas you can use the following. Note there is a \\;
separating the two create statements.
EmbeddedDatabase db = new EmbeddedDatabaseBuilder()
.setType(EmbeddedDatabaseType.H2)
.setName("testDb;DB_CLOSE_ON_EXIT=FALSE;MODE=Oracle;INIT=create " +
"schema if not exists " +
"schema_a\\;create schema if not exists schema_b;" +
"DB_CLOSE_DELAY=-1;")
.addScript("sql/provPlan/createTable.sql")
.addScript("sql/provPlan/insertData.sql")
.addScript("sql/provPlan/insertSpecRel.sql")
.build();
ref : http://www.h2database.com/html/features.html#execute_sql_on_connection