SyntaxFix

[r] sub and gsub function?

That won't work if the string contains more than one match... try this:

echo "/x/y/z/x" | awk '{ gsub("/", "_") ; system( "echo "  $0) }'

or better (if the echo isn't a placeholder for something else):

echo "/x/y/z/x" | awk '{ gsub("/", "_") ; print $0 }'

In your case you want to make a copy of the value before changing it:

echo "/x/y/z/x" | awk '{ c=$0; gsub("/", "_", c) ; system( "echo " $0 " " c )}'

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