[python] How do I plot list of tuples in Python?

I have the following data set. I would like to use Python or Gnuplot to plot the data. The tuples are of the form (x, y). The Y-axis should be a log axis, that is, log(y). A scatter plot or line plot would be ideal.

How can this be done?

 [(0, 6.0705199999997801e-08), (1, 2.1015700100300739e-08), 
 (2, 7.6280656623374823e-09), (3, 5.7348209304555086e-09), 
 (4, 3.6812203579604238e-09), (5, 4.1572516753310418e-09)]

As others have answered, scatter() or plot() will generate the plot you want. I suggest two refinements to answers that are already here:

1. Use numpy to create the x-coordinate list and y-coordinate list. Working with large data sets is faster in numpy than using the iteration in Python suggested in other answers.

2. Use pyplot to apply the logarithmic scale rather than operating directly on the data, unless you actually want to have the logs.

   import matplotlib.pyplot as plt
   import numpy as np
   
   data = [(2, 10), (3, 100), (4, 1000), (5, 100000)]
   data_in_array = np.array(data)
   '''
   That looks like array([[     2,     10],
                          [     3,    100],
                          [     4,   1000],
                          [     5, 100000]])
   '''
   
   transposed = data_in_array.T
   '''
   That looks like array([[     2,      3,      4,      5],
                          [    10,    100,   1000, 100000]])
   '''    
   
   x, y = transposed 
   
   # Here is the OO method
   # You could also the state-based methods of pyplot
   fig, ax = plt.subplots(1,1) # gets a handle for the AxesSubplot object
   ax.plot(x, y, 'ro')
   ax.plot(x, y, 'b-')
   ax.set_yscale('log')
   fig.show()
   

I've also used ax.set_xlim(1, 6) and ax.set_ylim(.1, 1e6) to make it pretty.

I've used the object-oriented interface to matplotlib. Because it offers greater flexibility and explicit clarity by using names of the objects created, the OO interface is preferred over the interactive state-based interface.

In matplotlib it would be:

import matplotlib.pyplot as plt

data =  [(0, 6.0705199999997801e-08), (1, 2.1015700100300739e-08),
 (2, 7.6280656623374823e-09), (3, 5.7348209304555086e-09),
 (4, 3.6812203579604238e-09), (5, 4.1572516753310418e-09)]

x_val = [x[0] for x in data]
y_val = [x[1] for x in data]

print x_val
plt.plot(x_val,y_val)
plt.plot(x_val,y_val,'or')
plt.show()

which would produce:

With gnuplot using gplot.py

from gplot import *

l = [(0, 6.0705199999997801e-08), (1, 2.1015700100300739e-08), 
 (2, 7.6280656623374823e-09), (3, 5.7348209304555086e-09), 
 (4, 3.6812203579604238e-09), (5, 4.1572516753310418e-09)]

gplot.log('y')
gplot(*zip(*l))

You could also use zip

import matplotlib.pyplot as plt

l = [(0, 6.0705199999997801e-08), (1, 2.1015700100300739e-08),
     (2, 7.6280656623374823e-09), (3, 5.7348209304555086e-09),
     (4, 3.6812203579604238e-09), (5, 4.1572516753310418e-09)]

x, y = zip(*l)

plt.plot(x, y)