There are different types of shells. The SSH command execution shell is a non-interactive shell, whereas your normal shell is either a login shell or an interactive shell. Description follows, from man bash:
A login shell is one whose first character of argument zero is a -, or one started with the --login option. An interactive shell is one started without non-option arguments and without the -c option whose standard input and error are both connected to terminals (as determined by isatty(3)), or one started with the -i option. PS1 is set and $- includes i if bash is interactive, allowing a shell script or a startup file to test this state. The following paragraphs describe how bash executes its startup files. If any of the files exist but cannot be read, bash reports an error. Tildes are expanded in file names as described below under Tilde Expansion in the EXPANSION section. When bash is invoked as an interactive login shell, or as a non-interactive shell with the --login option, it first reads and executes commands from the file /etc/profile, if that file exists. After reading that file, it looks for ~/.bash_profile, ~/.bash_login, and ~/.profile, in that order, and reads and executes commands from the first one that exists and is readable. The --noprofile option may be used when the shell is started to inhibit this behavĀ ior. When a login shell exits, bash reads and executes commands from the file ~/.bash_logout, if it exists. When an interactive shell that is not a login shell is started, bash reads and executes commands from ~/.bashrc, if that file exists. This may be inhibited by using the --norc option. The --rcfile file option will force bash to read and execute commands from file instead of ~/.bashrc. When bash is started non-interactively, to run a shell script, for example, it looks for the variable BASH_ENV in the environment, expands its value if it appears there, and uses the expanded value as the name of a file to read and execute. Bash behaves as if the following command were executed: if [ -n "$BASH_ENV" ]; then . "$BASH_ENV"; fi but the value of the PATH variable is not used to search for the file name.