This did the trick for me; full example:
HTML:
<a href="/my-popup.php" class="import">Click for my popup on same domain</a>
Javascript:
(function(){
var doc = document;
jQuery('.import').click(function(e){
e.preventDefault();
window.popup = window.open(jQuery(this).attr('href'), 'importwindow', 'width=500, height=200, top=100, left=200, toolbar=1');
window.popup.onload = function() {
window.popup.onbeforeunload = function(){
doc.location.reload(true); //will refresh page after popup close
}
}
});
})();