Using Script Console.
In case the jobs are grouped it's possible to either give it a full name with forward slashes:
getItemByFullName("folder_name/job_name")
job.getBuilds().each { it.delete() }
job.nextBuildNumber = 1
job.save()
or traverse the hierarchy like this:
def folder = Jenkins.instance.getItem("folder_name")
def job = folder.getItem("job_name")
job.getBuilds().each { it.delete() }
job.nextBuildNumber = 1
job.save()