You can get sqlite3.dll
file with encryption support from http://system.data.sqlite.org/.
1 - Go to http://system.data.sqlite.org/index.html/doc/trunk/www/downloads.wiki and download one of the packages. .NET version is irrelevant here.
2 - Extract SQLite.Interop.dll
from package and rename it to sqlite3.dll
. This DLL supports encryption via plaintext passwords or encryption keys.
The mentioned file is native and does NOT require .NET framework. It might need Visual C++ Runtime depending on the package you have downloaded.
UPDATE
This is the package that I've downloaded for 32-bit development: http://system.data.sqlite.org/blobs/1.0.94.0/sqlite-netFx40-static-binary-Win32-2010-1.0.94.0.zip