With EF Core in .NET Core you can use the keyword ThenInclude
:
return DatabaseContext.Applications
.Include(a => a.Children).ThenInclude(c => c.ChildRelationshipType);
Include childs from childrens collection :
return DatabaseContext.Applications
.Include(a => a.Childrens).ThenInclude(cs => cs.ChildRelationshipType1)
.Include(a => a.Childrens).ThenInclude(cs => cs.ChildRelationshipType2);