If the locked repo was the original, I can't imagine it was modifying it to clone it, so it was only preventing you from changing it in the middle and messing up the clone. It should be fine after removing the lock.
The new cloned copy (if it was a local clone) could be in any sort of malformed state, though, so you should throw it out and start it over. (If it was a remote clone, I would hope it failed and already threw out the incomplete copy.)