You can make a class to extend FPDF and add this:
class utfFPDF extends FPDF {
function Cell($w, $h=0, $txt="", $border=0, $ln=0, $align='', $fill=false, $link='')
{
if (!empty($txt)){
if (mb_detect_encoding($txt, 'UTF-8', false)){
$txt = iconv('UTF-8', 'ISO-8859-5', $txt);
}
}
parent::Cell($w, $h, $txt, $border, $ln, $align, $fill, $link);
}
}