You can pass program arguments on the command line and get them in your Java app like this:
public static void main(String[] args) {
String pathToXml = args[0];
....
}
Alternatively you pass a system property by changing the command line to:
java -Dpath-to-xml=enwiki-20111007-pages-articles.xml -jar wiki2txt
and your main class to:
public static void main(String[] args) {
String pathToXml = System.getProperty("path-to-xml");
....
}