For those having the percentages in a pandas Series, here is my implemantation of the Largest remainder method (as in Varun Vohra's answer), where you can even select the decimals to which you want to round.
import numpy as np
def largestRemainderMethod(pd_series, decimals=1):
floor_series = ((10**decimals * pd_series).astype(np.int)).apply(np.floor)
diff = 100 * (10**decimals) - floor_series.sum().astype(np.int)
series_decimals = pd_series - floor_series / (10**decimals)
series_sorted_by_decimals = series_decimals.sort_values(ascending=False)
for i in range(0, len(series_sorted_by_decimals)):
if i < diff:
series_sorted_by_decimals.iloc[[i]] = 1
else:
series_sorted_by_decimals.iloc[[i]] = 0
out_series = ((floor_series + series_sorted_by_decimals) / (10**decimals)).sort_values(ascending=False)
return out_series