Don't mess with the visibility flags of the container - FragmentTransaction.hide/show does that internally for you.
So the correct way to do this is:
FragmentManager fm = getFragmentManager();
fm.beginTransaction()
.setCustomAnimations(android.R.animator.fade_in, android.R.animator.fade_out)
.show(somefrag)
.commit();
OR if you are using android.support.v4.app.Fragment
FragmentManager fm = getSupportFragmentManager();
fm.beginTransaction()
.setCustomAnimations(android.R.anim.fade_in, android.R.anim.fade_out)
.show(somefrag)
.commit();