[mongodb] How to create a DB for MongoDB container on start up?

UPD Today I avoid Docker Swarm, secrets, and configs. I'd run it with docker-compose and the .env file. As long as I don't need autoscaling. If I do, I'd probably choose k8s. And database passwords, root account or not... Do they really matter when you're running a single database in a container not connected to the outside world?.. I'd like to know what you think about it, but Stack Overflow is probably not well suited for this sort of communication.

Mongo image can be affected by MONGO_INITDB_DATABASE variable, but it won't create the database. This variable determines current database when running /docker-entrypoint-initdb.d/* scripts. Since you can't use environment variables in scripts executed by Mongo, I went with a shell script:

docker-swarm.yml:

version: '3.1'

secrets:
  mongo-root-passwd:
    file: mongo-root-passwd
  mongo-user-passwd:
    file: mongo-user-passwd

services:
  mongo:
    image: mongo:3.2
    environment:
      MONGO_INITDB_ROOT_USERNAME: $MONGO_ROOT_USER
      MONGO_INITDB_ROOT_PASSWORD_FILE: /run/secrets/mongo-root-passwd
      MONGO_INITDB_USERNAME: $MONGO_USER
      MONGO_INITDB_PASSWORD_FILE: /run/secrets/mongo-user-passwd
      MONGO_INITDB_DATABASE: $MONGO_DB
    volumes:
      - ./init-mongo.sh:/docker-entrypoint-initdb.d/init-mongo.sh
    secrets:
      - mongo-root-passwd
      - mongo-user-passwd

init-mongo.sh:

mongo -- "$MONGO_INITDB_DATABASE" <<EOF
    var rootUser = '$MONGO_INITDB_ROOT_USERNAME';
    var rootPassword = '$MONGO_INITDB_ROOT_PASSWORD';
    var admin = db.getSiblingDB('admin');
    admin.auth(rootUser, rootPassword);

    var user = '$MONGO_INITDB_USERNAME';
    var passwd = '$(cat "$MONGO_INITDB_PASSWORD_FILE")';
    db.createUser({user: user, pwd: passwd, roles: ["readWrite"]});
EOF

Alternatively, you can store init-mongo.sh in configs (docker config create) and mount it with:

configs:
    init-mongo.sh:
        external: true
...
services:
    mongo:
        ...
        configs:
            - source: init-mongo.sh
              target: /docker-entrypoint-initdb.d/init-mongo.sh

And secrets can be not stored in a file.

A couple of gists on the matter.

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