[r] R - Concatenate two dataframes?

Given two dataframes a and b:

> a
           a           b           c
1 -0.2246894 -1.48167912 -1.65099363
2  0.5559320 -0.87898575 -0.15634590
3  1.8469466 -0.01487524 -0.53098215
4 -0.6875051  0.23880967  0.01824621
5 -0.6735163  0.75485292  0.44154092


> b
           a          c
1  0.4287284 -0.3295925
2  0.5201492  0.3341251
3 -2.6355570  1.7916780
4 -1.3645337  1.3642276
5 -0.4954542 -0.6660001

Is there a simple way to concatenate these so as to return a new data frame of the form below?

> new
           a                   b           c
1  -0.2246894   -1.48167912106676 -1.65099363
2   0.5559320  -0.878985746842256 -0.15634590
3   1.8469466 -0.0148752354840942 -0.53098215
4  -0.6875051   0.238809666690982  0.01824621
5  -0.6735163   0.754852923524198  0.44154092
6   0.4287284                  NA -0.32959248
7   0.5201492                  NA  0.33412510
8  -2.6355570                  NA  1.79167801
9  -1.3645337                  NA  1.36422764
10 -0.4954542                  NA -0.66600006

I want to merge the dataframes, match the headers and insert NA in for positions in dataframe b where the header is missing.

you can use the function

bind_rows(a,b)

from the dplyr library

Here's a simple little function that will rbind two datasets together after auto-detecting what columns are missing from each and adding them with all NAs.

For whatever reason this returns MUCH faster on larger datasets than using the merge function.

fastmerge <- function(d1, d2) {
  d1.names <- names(d1)
  d2.names <- names(d2)

  # columns in d1 but not in d2
  d2.add <- setdiff(d1.names, d2.names)

  # columns in d2 but not in d1
  d1.add <- setdiff(d2.names, d1.names)

  # add blank columns to d2
  if(length(d2.add) > 0) {
    for(i in 1:length(d2.add)) {
      d2[d2.add[i]] <- NA
    }
  }

  # add blank columns to d1
  if(length(d1.add) > 0) {
    for(i in 1:length(d1.add)) {
      d1[d1.add[i]] <- NA
    }
  }

  return(rbind(d1, d2))
}

You may use rbind but in this case you need to have the same number of columns in both tables, so try the following:

b$b<-as.double(NA) #keeping numeric format is essential for further calculations
new<-rbind(a,b)

You want "rbind".

b$b <- NA
new <- rbind(a, b)

rbind requires the data frames to have the same columns.

The first line adds column b to data frame b.

Results

> a <- data.frame(a=c(0,1,2), b=c(3,4,5), c=c(6,7,8))
> a
  a b c
1 0 3 6
2 1 4 7
3 2 5 8
> b <- data.frame(a=c(9,10,11), c=c(12,13,14))
> b
   a  c
1  9 12
2 10 13
3 11 14
> b$b <- NA
> b
   a  c  b
1  9 12 NA
2 10 13 NA
3 11 14 NA
> new <- rbind(a,b)
> new
   a  b  c
1  0  3  6
2  1  4  7
3  2  5  8
4  9 NA 12
5 10 NA 13
6 11 NA 14

Try the plyr package:

rbind.fill(a,b,c)