[r] calculating number of days between 2 columns of dates in data frame

Without your seeing your data (you can use the output of dput(head(survey)) to show us) this is a shot in the dark:

survey <- data.frame(date=c("2012/07/26","2012/07/25"),tx_start=c("2012/01/01","2012/01/01"))

survey$date_diff <- as.Date(as.character(survey$date), format="%Y/%m/%d")-
                  as.Date(as.character(survey$tx_start), format="%Y/%m/%d")
survey
       date   tx_start date_diff
1 2012/07/26 2012/01/01  207 days
2 2012/07/25 2012/01/01  206 days