I was able to use the name attribute that you described in your example for the loop I am working on and it worked, perhaps because I created unique ids? I'm still considering whether I should switch to an editor template instead as mentioned in the links in another answer.
@Html.RadioButtonFor(modelItem => item.Answers.AnswerYesNo, "true", new {Name = item.Description.QuestionId, id = string.Format("CBY{0}", item.Description.QuestionId), onclick = "setDescriptionVisibility(this)" }) Yes
@Html.RadioButtonFor(modelItem => item.Answers.AnswerYesNo, "false", new { Name = item.Description.QuestionId, id = string.Format("CBN{0}", item.Description.QuestionId), onclick = "setDescriptionVisibility(this)" } ) No