Use: https://github.com/mkoryak/floatThead
Docs: http://mkoryak.github.io/floatThead/examples/bootstrap3/
$(document).ready(function(){
$(".sticky-header").floatThead({top:50});
});
http://jsbin.com/zuzuqe/1/edit
HTML
<!-- Fixed navbar -->
<div class="navbar navbar-default navbar-fixed-top">
<div class="container">
<div class="navbar-header">
<button type="button" class="navbar-toggle" data-toggle="collapse" data-target=".navbar-collapse">
<span class="icon-bar"></span>
<span class="icon-bar"></span>
<span class="icon-bar"></span>
</button>
<a class="navbar-brand" href="#">Project name</a>
</div>
<div class="collapse navbar-collapse">
<ul class="nav navbar-nav">
<li class="active"><a href="#">Home</a></li>
<li><a href="#about">About</a></li>
<li><a href="#contact">Contact</a></li>
<li class="dropdown">
<a href="#" class="dropdown-toggle" data-toggle="dropdown">Dropdown <b class="caret"></b></a>
<ul class="dropdown-menu">
<li><a href="#">Action</a></li>
<li><a href="#">Another action</a></li>
<li><a href="#">Something else here</a></li>
<li class="divider"></li>
<li class="dropdown-header">Nav header</li>
<li><a href="#">Separated link</a></li>
<li><a href="#">One more separated link</a></li>
</ul>
</li>
</ul>
</div>
<!--/.nav-collapse -->
</div>
</div>
<!-- Begin page content -->
<div class="container">
<div class="page-header">
<h1>Sticky footer with fixed navbar</h1>
</div>
<p class="lead">Pin a fixed-height footer to the bottom of the viewport in desktop browsers with this custom HTML and CSS. A fixed navbar has been added within <code>#wrap</code> with <code>padding-top: 60px;</code> on the <code>.container</code>.</p>
<table class="table table-striped sticky-header">
<thead>
<tr>
<th>#</th>
<th>First Name</th>
<th>Last Name</th>
<th>Username</th>
</tr>
</thead>
<tbody>
<tr>
<td>1</td>
<td>Mark</td>
<td>Otto</td>
<td>@mdo</td>
</tr>
<tr>
<td>2</td>
<td>Jacob</td>
<td>Thornton</td>
<td>@fat</td>
</tr>
<tr>
<td>3</td>
<td>Larry</td>
<td>the Bird</td>
<td>@twitter</td>
</tr>
<tr>
<td>1</td>
<td>Mark</td>
<td>Otto</td>
<td>@mdo</td>
</tr>
<tr>
<td>2</td>
<td>Jacob</td>
<td>Thornton</td>
<td>@fat</td>
</tr>
<tr>
<td>3</td>
<td>Larry</td>
<td>the Bird</td>
<td>@twitter</td>
</tr>
<tr>
<td>1</td>
<td>Mark</td>
<td>Otto</td>
<td>@mdo</td>
</tr>
<tr>
<td>2</td>
<td>Jacob</td>
<td>Thornton</td>
<td>@fat</td>
</tr>
<tr>
<td>3</td>
<td>Larry</td>
<td>the Bird</td>
<td>@twitter</td>
</tr>
<tr>
<td>1</td>
<td>Mark</td>
<td>Otto</td>
<td>@mdo</td>
</tr>
<tr>
<td>2</td>
<td>Jacob</td>
<td>Thornton</td>
<td>@fat</td>
</tr>
<tr>
<td>3</td>
<td>Larry</td>
<td>the Bird</td>
<td>@twitter</td>
</tr>
</tbody>
</table>
<h3>Table 2</h3>
<table class="table table-striped sticky-header">
<thead>
<tr>
<th>#</th>
<th>New Table</th>
<th>Last Name</th>
<th>Username</th>
</tr>
</thead>
<tbody>
<tr>
<td>1</td>
<td>Mark</td>
<td>Otto</td>
<td>@mdo</td>
</tr>
<tr>
<td>2</td>
<td>Jacob</td>
<td>Thornton</td>
<td>@fat</td>
</tr>
<tr>
<td>3</td>
<td>Larry</td>
<td>the Bird</td>
<td>@twitter</td>
</tr>
<tr>
<td>1</td>
<td>Mark</td>
<td>Otto</td>
<td>@mdo</td>
</tr>
<tr>
<td>2</td>
<td>Jacob</td>
<td>Thornton</td>
<td>@fat</td>
</tr>
<tr>
<td>3</td>
<td>Larry</td>
<td>the Bird</td>
<td>@twitter</td>
</tr>
<tr>
<td>1</td>
<td>Mark</td>
<td>Otto</td>
<td>@mdo</td>
</tr>
<tr>
<td>2</td>
<td>Jacob</td>
<td>Thornton</td>
<td>@fat</td>
</tr>
<tr>
<td>3</td>
<td>Larry</td>
<td>the Bird</td>
<td>@twitter</td>
</tr>
<tr>
<td>1</td>
<td>Mark</td>
<td>Otto</td>
<td>@mdo</td>
</tr>
<tr>
<td>2</td>
<td>Jacob</td>
<td>Thornton</td>
<td>@fat</td>
</tr>
<tr>
<td>3</td>
<td>Larry</td>
<td>the Bird</td>
<td>@twitter</td>
</tr>
</tbody>
</table>
</div>
CSS
body{
padding-top:50px;
}
table.floatThead-table {
border-top: none;
border-bottom: none;
background-color: #fff;
}