[git] Detach (move) subdirectory into separate Git repository

I have a Git repository which contains a number of subdirectories. Now I have found that one of the subdirectories is unrelated to the other and should be detached to a separate repository.

How can I do this while keeping the history of the files within the subdirectory?

I guess I could make a clone and remove the unwanted parts of each clone, but I suppose this would give me the complete tree when checking out an older revision etc. This might be acceptable, but I would prefer to be able to pretend that the two repositories doesn't have a shared history.

Just to make it clear, I have the following structure:

XYZ/
    .git/
    XY1/
    ABC/
    XY2/

But I would like this instead:

XYZ/
    .git/
    XY1/
    XY2/
ABC/
    .git/
    ABC/

This question is related to git git-subtree git-filter-branch

The answer is


I recommend GitHub's guide to splitting subfolders into a new repository. The steps are similar to Paul's answer, but I found their instructions easier to understand.

I have modified the instructions so that they apply for a local repository, rather than one hosted on GitHub.


Splitting a subfolder out into a new repository

  1. Open Git Bash.

  2. Change the current working directory to the location where you want to create your new repository.

  3. Clone the repository that contains the subfolder.

git clone OLD-REPOSITORY-FOLDER NEW-REPOSITORY-FOLDER
  1. Change the current working directory to your cloned repository.

cd REPOSITORY-NAME
  1. To filter out the subfolder from the rest of the files in the repository, run git filter-branch, supplying this information:
    • FOLDER-NAME: The folder within your project that you'd like to create a separate repository from.
      • Tip: Windows users should use / to delimit folders.
    • BRANCH-NAME: The default branch for your current project, for example, master or gh-pages.

git filter-branch --prune-empty --subdirectory-filter FOLDER-NAME  BRANCH-NAME 
# Filter the specified branch in your directory and remove empty commits
Rewrite 48dc599c80e20527ed902928085e7861e6b3cbe6 (89/89)
Ref 'refs/heads/BRANCH-NAME' was rewritten

Here is a small modification to CoolAJ86's "The Easy Way™" answer in order to split multiple sub folders (let's say sub1and sub2) into a new git repository.

The Easy Way™ (multiple sub folders)

  1. Prepare the old repo

    pushd <big-repo>
    git filter-branch --tree-filter "mkdir <name-of-folder>; mv <sub1> <sub2> <name-of-folder>/" HEAD
    git subtree split -P <name-of-folder> -b <name-of-new-branch>
    popd
    

    Note: <name-of-folder> must NOT contain leading or trailing characters. For instance, the folder named subproject MUST be passed as subproject, NOT ./subproject/

    Note for windows users: when your folder depth is > 1, <name-of-folder> must have *nix style folder separator (/). For instance, the folder named path1\path2\subproject MUST be passed as path1/path2/subproject. Moreover don't use mvcommand but move.

    Final note: the unique and big difference with the base answer is the second line of the script "git filter-branch..."

  2. Create the new repo

    mkdir <new-repo>
    pushd <new-repo>
    
    git init
    git pull </path/to/big-repo> <name-of-new-branch>
    
  3. Link the new repo to Github or wherever

    git remote add origin <[email protected]:my-user/new-repo.git>
    git push origin -u master
    
  4. Cleanup, if desired

    popd # get out of <new-repo>
    pushd <big-repo>
    
    git rm -rf <name-of-folder>
    

    Note: This leaves all the historical references in the repository.See the Appendix in the original answer if you're actually concerned about having committed a password or you need to decreasing the file size of your .git folder.


I had exactly this problem but all the standard solutions based on git filter-branch were extremely slow. If you have a small repository then this may not be a problem, it was for me. I wrote another git filtering program based on libgit2 which as a first step creates branches for each filtering of the primary repository and then pushes these to clean repositories as the next step. On my repository (500Mb 100000 commits) the standard git filter-branch methods took days. My program takes minutes to do the same filtering.

It has the fabulous name of git_filter and lives here:

https://github.com/slobobaby/git_filter

on GitHub.

I hope it is useful to someone.


The Easier Way

  1. install git splits. I created it as a git extension, based on jkeating's solution.
  2. Split the directories into a local branch #change into your repo's directory cd /path/to/repo #checkout the branch git checkout XYZ
    #split multiple directories into new branch XYZ git splits -b XYZ XY1 XY2

  3. Create an empty repo somewhere. We'll assume we've created an empty repo called xyz on GitHub that has path : [email protected]:simpliwp/xyz.git

  4. Push to the new repo. #add a new remote origin for the empty repo so we can push to the empty repo on GitHub git remote add origin_xyz [email protected]:simpliwp/xyz.git #push the branch to the empty repo's master branch git push origin_xyz XYZ:master

  5. Clone the newly created remote repo into a new local directory
    #change current directory out of the old repo cd /path/to/where/you/want/the/new/local/repo #clone the remote repo you just pushed to git clone [email protected]:simpliwp/xyz.git


I'm sure git subtree is all fine and wonderful, but my subdirectories of git managed code that I wanted to move was all in eclipse. So if you're using egit, it's painfully easy. Take the project you want to move and team->disconnect it, and then team->share it to the new location. It will default to trying to use the old repo location, but you can uncheck the use-existing selection and pick the new place to move it. All hail egit.


Check out git_split project at https://github.com/vangorra/git_split

Turn git directories into their very own repositories in their own location. No subtree funny business. This script will take an existing directory in your git repository and turn that directory into an independent repository of its own. Along the way, it will copy over the entire change history for the directory you provided.

./git_split.sh <src_repo> <src_branch> <relative_dir_path> <dest_repo>
        src_repo  - The source repo to pull from.
        src_branch - The branch of the source repo to pull from. (usually master)
        relative_dir_path   - Relative path of the directory in the source repo to split.
        dest_repo - The repo to push to.

Put this into your gitconfig:

reduce-to-subfolder = !sh -c 'git filter-branch --tag-name-filter cat --prune-empty --subdirectory-filter cookbooks/unicorn HEAD && git reset --hard && git for-each-ref refs/original/ | cut -f 2 | xargs -n 1 git update-ref -d && git reflog expire --expire=now --all && git gc --aggressive --prune=now && git remote rm origin'

I’ve found that in order to properly delete the old history from the new repository, you have to do a little more work after the filter-branch step.

  1. Do the clone and the filter:

    git clone --no-hardlinks foo bar; cd bar
    git filter-branch --subdirectory-filter subdir/you/want
    
  2. Remove every reference to the old history. “origin” was keeping track of your clone, and “original” is where filter-branch saves the old stuff:

    git remote rm origin
    git update-ref -d refs/original/refs/heads/master
    git reflog expire --expire=now --all
    
  3. Even now, your history might be stuck in a packfile that fsck won’t touch. Tear it to shreds, creating a new packfile and deleting the unused objects:

    git repack -ad
    

There is an explanation of this in the manual for filter-branch.


Update: The git-subtree module was so useful that the git team pulled it into core and made it git subtree. See here: Detach (move) subdirectory into separate Git repository

git-subtree may be useful for this

http://github.com/apenwarr/git-subtree/blob/master/git-subtree.txt (deprecated)

http://psionides.jogger.pl/2010/02/04/sharing-code-between-projects-with-git-subtree/


This is no longer so complex you can just use the git filter-branch command on a clone of you repo to cull the subdirectories you don't want and then push to the new remote.

git filter-branch --prune-empty --subdirectory-filter <YOUR_SUBDIR_TO_KEEP> master
git push <MY_NEW_REMOTE_URL> -f .

You can easily try the https://help.github.com/enterprise/2.15/user/articles/splitting-a-subfolder-out-into-a-new-repository/

This worked for me. The issues i faced in the steps given above are

  1. in this command git filter-branch --prune-empty --subdirectory-filter FOLDER-NAME BRANCH-NAME The BRANCH-NAME is master

  2. if the last step fails when committing due to protection issue follow - https://docs.gitlab.com/ee/user/project/protected_branches.html


I had exactly this problem but all the standard solutions based on git filter-branch were extremely slow. If you have a small repository then this may not be a problem, it was for me. I wrote another git filtering program based on libgit2 which as a first step creates branches for each filtering of the primary repository and then pushes these to clean repositories as the next step. On my repository (500Mb 100000 commits) the standard git filter-branch methods took days. My program takes minutes to do the same filtering.

It has the fabulous name of git_filter and lives here:

https://github.com/slobobaby/git_filter

on GitHub.

I hope it is useful to someone.


Update: The git-subtree module was so useful that the git team pulled it into core and made it git subtree. See here: Detach (move) subdirectory into separate Git repository

git-subtree may be useful for this

http://github.com/apenwarr/git-subtree/blob/master/git-subtree.txt (deprecated)

http://psionides.jogger.pl/2010/02/04/sharing-code-between-projects-with-git-subtree/


You can easily try the https://help.github.com/enterprise/2.15/user/articles/splitting-a-subfolder-out-into-a-new-repository/

This worked for me. The issues i faced in the steps given above are

  1. in this command git filter-branch --prune-empty --subdirectory-filter FOLDER-NAME BRANCH-NAME The BRANCH-NAME is master

  2. if the last step fails when committing due to protection issue follow - https://docs.gitlab.com/ee/user/project/protected_branches.html


When running git filter-branch using a newer version of git (2.22+ maybe?), it says to use this new tool git-filter-repo. This tool certainly simplified things for me.

Filtering with filter-repo

Commands to create the XYZ repo from the original question:

# create local clone of original repo in directory XYZ
tmp $ git clone [email protected]:user/original.git XYZ

# switch to working in XYZ
tmp $ cd XYZ

# keep subdirectories XY1 and XY2 (dropping ABC)
XYZ $ git filter-repo --path XY1 --path XY2

# note: original remote origin was dropped
# (protecting against accidental pushes overwriting original repo data)

# XYZ $ ls -1
# XY1
# XY2

# XYZ $ git log --oneline
# last commit modifying ./XY1 or ./XY2
# first commit modifying ./XY1 or ./XY2

# point at new hosted, dedicated repo
XYZ $ git remote add origin [email protected]:user/XYZ.git

# push (and track) remote master
XYZ $ git push -u origin master

assumptions: * remote XYZ repo was new and empty before the push

Filtering and moving

In my case, I also wanted to move a couple of directories for a more consistent structure. Initially, I ran that simple filter-repo command followed by git mv dir-to-rename, but I found I could get a slightly "better" history using the --path-rename option. Instead of seeing last modified 5 hours ago on moved files in the new repo I now see last year (in the GitHub UI), which matches the modified times in the original repo.

Instead of...

git filter-repo --path XY1 --path XY2 --path inconsistent
git mv inconsistent XY3  # which updates last modification time

I ultimately ran...

git filter-repo --path XY1 --path XY2 --path inconsistent --path-rename inconsistent:XY3
Notes:
  • I thought the Git Rev News blog post explained well the reasoning behind creating yet another repo-filtering tool.
  • I initially tried the path of creating a sub-directory matching the target repo name in the original repository and then filtering (using git filter-repo --subdirectory-filter dir-matching-new-repo-name). That command correctly converted that subdirectory to the root of the copied local repo, but it also resulted in a history of only the three commits it took to create the subdirectory. (I hadn't realized that --path could be specified multiple times; thereby, obviating the need to create a subdirectory in the source repo.) Since someone had committed to the source repo by the time I noticed that I'd failed to carry forward the history, I just used git reset commit-before-subdir-move --hard after the clone command, and added --force to the filter-repo command to get it to operate on the slightly modified local clone.
git clone ...
git reset HEAD~7 --hard      # roll back before mistake
git filter-repo ... --force  # tell filter-repo the alterations are expected
  • I was stumped on the install since I was unaware of the extension pattern with git, but ultimately I cloned git-filter-repo and symlinked it to $(git --exec-path):
ln -s ~/github/newren/git-filter-repo/git-filter-repo $(git --exec-path)

The original question wants XYZ/ABC/(*files) to become ABC/ABC/(*files). After implementing the accepted answer for my own code, I noticed that it actually changes XYZ/ABC/(*files) into ABC/(*files). The filter-branch man page even says,

The result will contain that directory (and only that) as its project root."

In other words, it promotes the top-level folder "up" one level. That's an important distinction because, for example, in my history I had renamed a top-level folder. By promoting folders "up" one level, git loses continuity at the commit where I did the rename.

I lost contiuity after filter-branch

My answer to the question then is to make 2 copies of the repository and manually delete the folder(s) you want to keep in each. The man page backs me up with this:

[...] avoid using [this command] if a simple single commit would suffice to fix your problem


Use this filter command to remove a subdirectory, while preserving your tags and branches:

git filter-branch --index-filter \
"git rm -r -f --cached --ignore-unmatch DIR" --prune-empty \
--tag-name-filter cat -- --all

I've found quite straight forward solution, The idea is to copy repository and then just remove unnecessary part. This is how it works:

1) Clone a repository you'd like to split

git clone [email protected]:testrepo/test.git

2) Move to git folder

cd test/

2) Remove unnecessary folders and commit it

rm -r ABC/
git add .
enter code here
git commit -m 'Remove ABC'

3) Remove unnecessary folder(s) form history with BFG

cd ..
java -jar bfg.jar --delete-folders "{ABC}" test
cd test/
git reflog expire --expire=now --all && git gc --prune=now --aggressive

for multiply folders you can use comma

java -jar bfg.jar --delete-folders "{ABC1,ABC2}" metric.git

4) Check that history doesn't contains the files/folders you just deleted

git log --diff-filter=D --summary | grep delete

5) Now you have clean repository without ABC, so just push it into new origin

remote add origin [email protected]:username/new_repo
git push -u origin master

That's it. You can repeat the steps to get another repository,

just remove XY1,XY2 and rename XYZ -> ABC on step 3


Proper way now is the following:

git filter-branch --prune-empty --subdirectory-filter FOLDER_NAME [first_branch] [another_branch]

GitHub now even have small article about such cases.

But be sure to clone your original repo to separate directory first (as it would delete all the files and other directories and you probable need to work with them).

So your algorithm should be:

  1. clone your remote repo to another directory
  2. using git filter-branch left only files under some subdirectory, push to new remote
  3. create commit to remove this subdirectory from your original remote repo

I’ve found that in order to properly delete the old history from the new repository, you have to do a little more work after the filter-branch step.

  1. Do the clone and the filter:

    git clone --no-hardlinks foo bar; cd bar
    git filter-branch --subdirectory-filter subdir/you/want
    
  2. Remove every reference to the old history. “origin” was keeping track of your clone, and “original” is where filter-branch saves the old stuff:

    git remote rm origin
    git update-ref -d refs/original/refs/heads/master
    git reflog expire --expire=now --all
    
  3. Even now, your history might be stuck in a packfile that fsck won’t touch. Tear it to shreds, creating a new packfile and deleting the unused objects:

    git repack -ad
    

There is an explanation of this in the manual for filter-branch.


The Easy Way™

It turns out that this is such a common and useful practice that the overlords of Git made it really easy, but you have to have a newer version of Git (>= 1.7.11 May 2012). See the appendix for how to install the latest Git. Also, there's a real-world example in the walkthrough below.

  1. Prepare the old repo

     cd <big-repo>
     git subtree split -P <name-of-folder> -b <name-of-new-branch>
    

Note: <name-of-folder> must NOT contain leading or trailing characters. For instance, the folder named subproject MUST be passed as subproject, NOT ./subproject/

Note for Windows users: When your folder depth is > 1, <name-of-folder> must have *nix style folder separator (/). For instance, the folder named path1\path2\subproject MUST be passed as path1/path2/subproject

  1. Create the new repo

     mkdir ~/<new-repo> && cd ~/<new-repo>
     git init
     git pull </path/to/big-repo> <name-of-new-branch>
    
  2. Link the new repo to GitHub or wherever

     git remote add origin <[email protected]:user/new-repo.git>
     git push -u origin master
    
  3. Cleanup inside <big-repo>, if desired

     git rm -rf <name-of-folder>
    

Note: This leaves all the historical references in the repository. See the Appendix below if you're actually concerned about having committed a password or you need to decreasing the file size of your .git folder.


Walkthrough

These are the same steps as above, but following my exact steps for my repository instead of using <meta-named-things>.

Here's a project I have for implementing JavaScript browser modules in node:

tree ~/node-browser-compat

node-browser-compat
+-- ArrayBuffer
+-- Audio
+-- Blob
+-- FormData
+-- atob
+-- btoa
+-- location
+-- navigator

I want to split out a single folder, btoa, into a separate Git repository

cd ~/node-browser-compat/
git subtree split -P btoa -b btoa-only

I now have a new branch, btoa-only, that only has commits for btoa and I want to create a new repository.

mkdir ~/btoa/ && cd ~/btoa/
git init
git pull ~/node-browser-compat btoa-only

Next, I create a new repo on GitHub or Bitbucket, or whatever and add it as the origin

git remote add origin [email protected]:node-browser-compat/btoa.git
git push -u origin master

Happy day!

Note: If you created a repo with a README.md, .gitignore and LICENSE, you will need to pull first:

git pull origin master
git push origin master

Lastly, I'll want to remove the folder from the bigger repo

git rm -rf btoa

Appendix

Latest Git on macOS

To get the latest version of Git using Homebrew:

brew install git

Latest Git on Ubuntu

sudo apt-get update
sudo apt-get install git
git --version

If that doesn't work (you have a very old version of Ubuntu), try

sudo add-apt-repository ppa:git-core/ppa
sudo apt-get update
sudo apt-get install git

If that still doesn't work, try

sudo chmod +x /usr/share/doc/git/contrib/subtree/git-subtree.sh
sudo ln -s \
/usr/share/doc/git/contrib/subtree/git-subtree.sh \
/usr/lib/git-core/git-subtree

Thanks to rui.araujo from the comments.

Clearing your history

By default removing files from Git doesn't actually remove them, it just commits that they aren't there anymore. If you want to actually remove the historical references (i.e. you committed a password), you need to do this:

git filter-branch --prune-empty --tree-filter 'rm -rf <name-of-folder>' HEAD

After that, you can check that your file or folder no longer shows up in the Git history at all

git log -- <name-of-folder> # should show nothing

However, you can't "push" deletes to GitHub and the like. If you try, you'll get an error and you'll have to git pull before you can git push - and then you're back to having everything in your history.

So if you want to delete history from the "origin" - meaning to delete it from GitHub, Bitbucket, etc - you'll need to delete the repo and re-push a pruned copy of the repo. But wait - there's more! - if you're really concerned about getting rid of a password or something like that you'll need to prune the backup (see below).

Making .git smaller

The aforementioned delete history command still leaves behind a bunch of backup files - because Git is all too kind in helping you to not ruin your repo by accident. It will eventually delete orphaned files over the days and months, but it leaves them there for a while in case you realize that you accidentally deleted something you didn't want to.

So if you really want to empty the trash to reduce the clone size of a repo immediately you have to do all of this really weird stuff:

rm -rf .git/refs/original/ && \
git reflog expire --all && \
git gc --aggressive --prune=now

git reflog expire --all --expire-unreachable=0
git repack -A -d
git prune

That said, I'd recommend not performing these steps unless you know that you need to - just in case you did prune the wrong subdirectory, y'know? The backup files shouldn't get cloned when you push the repo, they'll just be in your local copy.

Credit


For what it's worth, here is how using GitHub on a Windows machine. Let's say you have a cloned repo in residing in C:\dir1. The directory structure looks like this: C:\dir1\dir2\dir3. The dir3 directory is the one I want to be a new separate repo.

Github:

  1. Create your new repository: MyTeam/mynewrepo

Bash Prompt:

  1. $ cd c:/Dir1
  2. $ git filter-branch --prune-empty --subdirectory-filter dir2/dir3 HEAD
    Returned: Ref 'refs/heads/master' was rewritten (fyi: dir2/dir3 is case sensitive.)

  3. $ git remote add some_name [email protected]:MyTeam/mynewrepo.git
    git remote add origin etc. did not work, returned "remote origin already exists"

  4. $ git push --progress some_name master


I've found quite straight forward solution, The idea is to copy repository and then just remove unnecessary part. This is how it works:

1) Clone a repository you'd like to split

git clone [email protected]:testrepo/test.git

2) Move to git folder

cd test/

2) Remove unnecessary folders and commit it

rm -r ABC/
git add .
enter code here
git commit -m 'Remove ABC'

3) Remove unnecessary folder(s) form history with BFG

cd ..
java -jar bfg.jar --delete-folders "{ABC}" test
cd test/
git reflog expire --expire=now --all && git gc --prune=now --aggressive

for multiply folders you can use comma

java -jar bfg.jar --delete-folders "{ABC1,ABC2}" metric.git

4) Check that history doesn't contains the files/folders you just deleted

git log --diff-filter=D --summary | grep delete

5) Now you have clean repository without ABC, so just push it into new origin

remote add origin [email protected]:username/new_repo
git push -u origin master

That's it. You can repeat the steps to get another repository,

just remove XY1,XY2 and rename XYZ -> ABC on step 3


As I mentioned above, I had to use the reverse solution (deleting all commits not touching my dir/subdir/targetdir) which seemed to work pretty well removing about 95% of the commits (as desired). There are, however, two small issues remaining.

FIRST, filter-branch did a bang up job of removing commits which introduce or modify code but apparently, merge commits are beneath its station in the Gitiverse.

This is a cosmetic issue which I can probably live with (he says...backing away slowly with eyes averted).

SECOND the few commits that remain are pretty much ALL duplicated! I seem to have acquired a second, redundant timeline that spans just about the entire history of the project. The interesting thing (which you can see from the picture below), is that my three local branches are not all on the same timeline (which is, certainly why it exists and isn't just garbage collected).

The only thing I can imagine is that one of the deleted commits was, perhaps, the single merge commit that filter-branch actually did delete, and that created the parallel timeline as each now-unmerged strand took its own copy of the commits. (shrug Where's my TARDiS?) I'm pretty sure I can fix this issue, though I'd really love to understand how it happened.

In the case of crazy mergefest-O-RAMA, I'll likely be leaving that one alone since it has so firmly entrenched itself in my commit history—menacing at me whenever I come near—, it doesn't seem to be actually causing any non-cosmetic problems and because it is quite pretty in Tower.app.


Edit: Bash script added.

The answers given here worked just partially for me; Lots of big files remained in the cache. What finally worked (after hours in #git on freenode):

git clone --no-hardlinks file:///SOURCE /tmp/blubb
cd blubb
git filter-branch --subdirectory-filter ./PATH_TO_EXTRACT  --prune-empty --tag-name-filter cat -- --all
git clone file:///tmp/blubb/ /tmp/blooh
cd /tmp/blooh
git reflog expire --expire=now --all
git repack -ad
git gc --prune=now

With the previous solutions, the repository size was around 100 MB. This one brought it down to 1.7 MB. Maybe it helps somebody :)


The following bash script automates the task:

!/bin/bash

if (( $# < 3 ))
then
    echo "Usage:   $0 </path/to/repo/> <directory/to/extract/> <newName>"
    echo
    echo "Example: $0 /Projects/42.git first/answer/ firstAnswer"
    exit 1
fi


clone=/tmp/${3}Clone
newN=/tmp/${3}

git clone --no-hardlinks file://$1 ${clone}
cd ${clone}

git filter-branch --subdirectory-filter $2  --prune-empty --tag-name-filter cat -- --all

git clone file://${clone} ${newN}
cd ${newN}

git reflog expire --expire=now --all
git repack -ad
git gc --prune=now

You might need something like "git reflog expire --expire=now --all" before the garbage collection to actually clean the files out. git filter-branch just removes references in the history, but doesn't remove the reflog entries that hold the data. Of course, test this first.

My disk usage dropped dramatically in doing this, though my initial conditions were somewhat different. Perhaps --subdirectory-filter negates this need, but I doubt it.


Edit: Bash script added.

The answers given here worked just partially for me; Lots of big files remained in the cache. What finally worked (after hours in #git on freenode):

git clone --no-hardlinks file:///SOURCE /tmp/blubb
cd blubb
git filter-branch --subdirectory-filter ./PATH_TO_EXTRACT  --prune-empty --tag-name-filter cat -- --all
git clone file:///tmp/blubb/ /tmp/blooh
cd /tmp/blooh
git reflog expire --expire=now --all
git repack -ad
git gc --prune=now

With the previous solutions, the repository size was around 100 MB. This one brought it down to 1.7 MB. Maybe it helps somebody :)


The following bash script automates the task:

!/bin/bash

if (( $# < 3 ))
then
    echo "Usage:   $0 </path/to/repo/> <directory/to/extract/> <newName>"
    echo
    echo "Example: $0 /Projects/42.git first/answer/ firstAnswer"
    exit 1
fi


clone=/tmp/${3}Clone
newN=/tmp/${3}

git clone --no-hardlinks file://$1 ${clone}
cd ${clone}

git filter-branch --subdirectory-filter $2  --prune-empty --tag-name-filter cat -- --all

git clone file://${clone} ${newN}
cd ${newN}

git reflog expire --expire=now --all
git repack -ad
git gc --prune=now

Paul's answer creates a new repository containing /ABC, but does not remove /ABC from within /XYZ. The following command will remove /ABC from within /XYZ:

git filter-branch --tree-filter "rm -rf ABC" --prune-empty HEAD

Of course, test it in a 'clone --no-hardlinks' repository first, and follow it with the reset, gc and prune commands Paul lists.


It appears that most (all?) of the answers here rely on some form of git filter-branch --subdirectory-filter and its ilk. This may work "most times" however for some cases, for instance the case of when you renamed the folder, ex:

 ABC/
    /move_this_dir # did some work here, then renamed it to

ABC/
    /move_this_dir_renamed

If you do a normal git filter style to extract "move_this_dir_renamed" you will lose file change history that occurred from back when it was initially "move_this_dir" (ref).

It thus appears that the only way to really keep all change history (if yours is a case like this), is, in essence, to copy the repository (create a new repo, set that to be the origin), then nuke everything else and rename the subdirectory to the parent like this:

  1. Clone the multi-module project locally
  2. Branches - check what's there: git branch -a
  3. Do a checkout to each branch to be included in the split to get a local copy on your workstation: git checkout --track origin/branchABC
  4. Make a copy in a new directory: cp -r oldmultimod simple
  5. Go into the new project copy: cd simple
  6. Get rid of the other modules that aren't needed in this project:
  7. git rm otherModule1 other2 other3
  8. Now only the subdir of the target module remains
  9. Get rid of the module subdir so that the module root becomes the new project root
  10. git mv moduleSubdir1/* .
  11. Delete the relic subdir: rmdir moduleSubdir1
  12. Check changes at any point: git status
  13. Create the new git repo and copy its URL to point this project into it:
  14. git remote set-url origin http://mygithost:8080/git/our-splitted-module-repo
  15. Verify this is good: git remote -v
  16. Push the changes up to the remote repo: git push
  17. Go to the remote repo and check it's all there
  18. Repeat it for any other branch needed: git checkout branch2

This follows the github doc "Splitting a subfolder out into a new repository" steps 6-11 to push the module to a new repo.

This will not save you any space in your .git folder, but it will preserve all your change history for those files even across renames. And this may not be worth it if there isn't "a lot" of history lost, etc. But at least you are guaranteed not to lose older commits!


You might need something like "git reflog expire --expire=now --all" before the garbage collection to actually clean the files out. git filter-branch just removes references in the history, but doesn't remove the reflog entries that hold the data. Of course, test this first.

My disk usage dropped dramatically in doing this, though my initial conditions were somewhat different. Perhaps --subdirectory-filter negates this need, but I doubt it.


For what it's worth, here is how using GitHub on a Windows machine. Let's say you have a cloned repo in residing in C:\dir1. The directory structure looks like this: C:\dir1\dir2\dir3. The dir3 directory is the one I want to be a new separate repo.

Github:

  1. Create your new repository: MyTeam/mynewrepo

Bash Prompt:

  1. $ cd c:/Dir1
  2. $ git filter-branch --prune-empty --subdirectory-filter dir2/dir3 HEAD
    Returned: Ref 'refs/heads/master' was rewritten (fyi: dir2/dir3 is case sensitive.)

  3. $ git remote add some_name [email protected]:MyTeam/mynewrepo.git
    git remote add origin etc. did not work, returned "remote origin already exists"

  4. $ git push --progress some_name master


The Easy Way™

It turns out that this is such a common and useful practice that the overlords of Git made it really easy, but you have to have a newer version of Git (>= 1.7.11 May 2012). See the appendix for how to install the latest Git. Also, there's a real-world example in the walkthrough below.

  1. Prepare the old repo

     cd <big-repo>
     git subtree split -P <name-of-folder> -b <name-of-new-branch>
    

Note: <name-of-folder> must NOT contain leading or trailing characters. For instance, the folder named subproject MUST be passed as subproject, NOT ./subproject/

Note for Windows users: When your folder depth is > 1, <name-of-folder> must have *nix style folder separator (/). For instance, the folder named path1\path2\subproject MUST be passed as path1/path2/subproject

  1. Create the new repo

     mkdir ~/<new-repo> && cd ~/<new-repo>
     git init
     git pull </path/to/big-repo> <name-of-new-branch>
    
  2. Link the new repo to GitHub or wherever

     git remote add origin <[email protected]:user/new-repo.git>
     git push -u origin master
    
  3. Cleanup inside <big-repo>, if desired

     git rm -rf <name-of-folder>
    

Note: This leaves all the historical references in the repository. See the Appendix below if you're actually concerned about having committed a password or you need to decreasing the file size of your .git folder.


Walkthrough

These are the same steps as above, but following my exact steps for my repository instead of using <meta-named-things>.

Here's a project I have for implementing JavaScript browser modules in node:

tree ~/node-browser-compat

node-browser-compat
+-- ArrayBuffer
+-- Audio
+-- Blob
+-- FormData
+-- atob
+-- btoa
+-- location
+-- navigator

I want to split out a single folder, btoa, into a separate Git repository

cd ~/node-browser-compat/
git subtree split -P btoa -b btoa-only

I now have a new branch, btoa-only, that only has commits for btoa and I want to create a new repository.

mkdir ~/btoa/ && cd ~/btoa/
git init
git pull ~/node-browser-compat btoa-only

Next, I create a new repo on GitHub or Bitbucket, or whatever and add it as the origin

git remote add origin [email protected]:node-browser-compat/btoa.git
git push -u origin master

Happy day!

Note: If you created a repo with a README.md, .gitignore and LICENSE, you will need to pull first:

git pull origin master
git push origin master

Lastly, I'll want to remove the folder from the bigger repo

git rm -rf btoa

Appendix

Latest Git on macOS

To get the latest version of Git using Homebrew:

brew install git

Latest Git on Ubuntu

sudo apt-get update
sudo apt-get install git
git --version

If that doesn't work (you have a very old version of Ubuntu), try

sudo add-apt-repository ppa:git-core/ppa
sudo apt-get update
sudo apt-get install git

If that still doesn't work, try

sudo chmod +x /usr/share/doc/git/contrib/subtree/git-subtree.sh
sudo ln -s \
/usr/share/doc/git/contrib/subtree/git-subtree.sh \
/usr/lib/git-core/git-subtree

Thanks to rui.araujo from the comments.

Clearing your history

By default removing files from Git doesn't actually remove them, it just commits that they aren't there anymore. If you want to actually remove the historical references (i.e. you committed a password), you need to do this:

git filter-branch --prune-empty --tree-filter 'rm -rf <name-of-folder>' HEAD

After that, you can check that your file or folder no longer shows up in the Git history at all

git log -- <name-of-folder> # should show nothing

However, you can't "push" deletes to GitHub and the like. If you try, you'll get an error and you'll have to git pull before you can git push - and then you're back to having everything in your history.

So if you want to delete history from the "origin" - meaning to delete it from GitHub, Bitbucket, etc - you'll need to delete the repo and re-push a pruned copy of the repo. But wait - there's more! - if you're really concerned about getting rid of a password or something like that you'll need to prune the backup (see below).

Making .git smaller

The aforementioned delete history command still leaves behind a bunch of backup files - because Git is all too kind in helping you to not ruin your repo by accident. It will eventually delete orphaned files over the days and months, but it leaves them there for a while in case you realize that you accidentally deleted something you didn't want to.

So if you really want to empty the trash to reduce the clone size of a repo immediately you have to do all of this really weird stuff:

rm -rf .git/refs/original/ && \
git reflog expire --all && \
git gc --aggressive --prune=now

git reflog expire --all --expire-unreachable=0
git repack -A -d
git prune

That said, I'd recommend not performing these steps unless you know that you need to - just in case you did prune the wrong subdirectory, y'know? The backup files shouldn't get cloned when you push the repo, they'll just be in your local copy.

Credit


It appears that most (all?) of the answers here rely on some form of git filter-branch --subdirectory-filter and its ilk. This may work "most times" however for some cases, for instance the case of when you renamed the folder, ex:

 ABC/
    /move_this_dir # did some work here, then renamed it to

ABC/
    /move_this_dir_renamed

If you do a normal git filter style to extract "move_this_dir_renamed" you will lose file change history that occurred from back when it was initially "move_this_dir" (ref).

It thus appears that the only way to really keep all change history (if yours is a case like this), is, in essence, to copy the repository (create a new repo, set that to be the origin), then nuke everything else and rename the subdirectory to the parent like this:

  1. Clone the multi-module project locally
  2. Branches - check what's there: git branch -a
  3. Do a checkout to each branch to be included in the split to get a local copy on your workstation: git checkout --track origin/branchABC
  4. Make a copy in a new directory: cp -r oldmultimod simple
  5. Go into the new project copy: cd simple
  6. Get rid of the other modules that aren't needed in this project:
  7. git rm otherModule1 other2 other3
  8. Now only the subdir of the target module remains
  9. Get rid of the module subdir so that the module root becomes the new project root
  10. git mv moduleSubdir1/* .
  11. Delete the relic subdir: rmdir moduleSubdir1
  12. Check changes at any point: git status
  13. Create the new git repo and copy its URL to point this project into it:
  14. git remote set-url origin http://mygithost:8080/git/our-splitted-module-repo
  15. Verify this is good: git remote -v
  16. Push the changes up to the remote repo: git push
  17. Go to the remote repo and check it's all there
  18. Repeat it for any other branch needed: git checkout branch2

This follows the github doc "Splitting a subfolder out into a new repository" steps 6-11 to push the module to a new repo.

This will not save you any space in your .git folder, but it will preserve all your change history for those files even across renames. And this may not be worth it if there isn't "a lot" of history lost, etc. But at least you are guaranteed not to lose older commits!


The Easier Way

  1. install git splits. I created it as a git extension, based on jkeating's solution.
  2. Split the directories into a local branch #change into your repo's directory cd /path/to/repo #checkout the branch git checkout XYZ
    #split multiple directories into new branch XYZ git splits -b XYZ XY1 XY2

  3. Create an empty repo somewhere. We'll assume we've created an empty repo called xyz on GitHub that has path : [email protected]:simpliwp/xyz.git

  4. Push to the new repo. #add a new remote origin for the empty repo so we can push to the empty repo on GitHub git remote add origin_xyz [email protected]:simpliwp/xyz.git #push the branch to the empty repo's master branch git push origin_xyz XYZ:master

  5. Clone the newly created remote repo into a new local directory
    #change current directory out of the old repo cd /path/to/where/you/want/the/new/local/repo #clone the remote repo you just pushed to git clone [email protected]:simpliwp/xyz.git


The original question wants XYZ/ABC/(*files) to become ABC/ABC/(*files). After implementing the accepted answer for my own code, I noticed that it actually changes XYZ/ABC/(*files) into ABC/(*files). The filter-branch man page even says,

The result will contain that directory (and only that) as its project root."

In other words, it promotes the top-level folder "up" one level. That's an important distinction because, for example, in my history I had renamed a top-level folder. By promoting folders "up" one level, git loses continuity at the commit where I did the rename.

I lost contiuity after filter-branch

My answer to the question then is to make 2 copies of the repository and manually delete the folder(s) you want to keep in each. The man page backs me up with this:

[...] avoid using [this command] if a simple single commit would suffice to fix your problem


I'm sure git subtree is all fine and wonderful, but my subdirectories of git managed code that I wanted to move was all in eclipse. So if you're using egit, it's painfully easy. Take the project you want to move and team->disconnect it, and then team->share it to the new location. It will default to trying to use the old repo location, but you can uncheck the use-existing selection and pick the new place to move it. All hail egit.


This is no longer so complex you can just use the git filter-branch command on a clone of you repo to cull the subdirectories you don't want and then push to the new remote.

git filter-branch --prune-empty --subdirectory-filter <YOUR_SUBDIR_TO_KEEP> master
git push <MY_NEW_REMOTE_URL> -f .

To add to Paul's answer, I found that to ultimately recover space, I have to push HEAD to a clean repository and that trims down the size of the .git/objects/pack directory.

i.e.

$ mkdir ...ABC.git
$ cd ...ABC.git
$ git init --bare

After the gc prune, also do:

$ git push ...ABC.git HEAD

Then you can do

$ git clone ...ABC.git

and the size of ABC/.git is reduced

Actually, some of the time consuming steps (e.g. git gc) aren't needed with the push to clean repository, i.e.:

$ git clone --no-hardlinks /XYZ /ABC
$ git filter-branch --subdirectory-filter ABC HEAD
$ git reset --hard
$ git push ...ABC.git HEAD

Put this into your gitconfig:

reduce-to-subfolder = !sh -c 'git filter-branch --tag-name-filter cat --prune-empty --subdirectory-filter cookbooks/unicorn HEAD && git reset --hard && git for-each-ref refs/original/ | cut -f 2 | xargs -n 1 git update-ref -d && git reflog expire --expire=now --all && git gc --aggressive --prune=now && git remote rm origin'

Proper way now is the following:

git filter-branch --prune-empty --subdirectory-filter FOLDER_NAME [first_branch] [another_branch]

GitHub now even have small article about such cases.

But be sure to clone your original repo to separate directory first (as it would delete all the files and other directories and you probable need to work with them).

So your algorithm should be:

  1. clone your remote repo to another directory
  2. using git filter-branch left only files under some subdirectory, push to new remote
  3. create commit to remove this subdirectory from your original remote repo

Check out git_split project at https://github.com/vangorra/git_split

Turn git directories into their very own repositories in their own location. No subtree funny business. This script will take an existing directory in your git repository and turn that directory into an independent repository of its own. Along the way, it will copy over the entire change history for the directory you provided.

./git_split.sh <src_repo> <src_branch> <relative_dir_path> <dest_repo>
        src_repo  - The source repo to pull from.
        src_branch - The branch of the source repo to pull from. (usually master)
        relative_dir_path   - Relative path of the directory in the source repo to split.
        dest_repo - The repo to push to.

Paul's answer creates a new repository containing /ABC, but does not remove /ABC from within /XYZ. The following command will remove /ABC from within /XYZ:

git filter-branch --tree-filter "rm -rf ABC" --prune-empty HEAD

Of course, test it in a 'clone --no-hardlinks' repository first, and follow it with the reset, gc and prune commands Paul lists.


Use this filter command to remove a subdirectory, while preserving your tags and branches:

git filter-branch --index-filter \
"git rm -r -f --cached --ignore-unmatch DIR" --prune-empty \
--tag-name-filter cat -- --all

I recommend GitHub's guide to splitting subfolders into a new repository. The steps are similar to Paul's answer, but I found their instructions easier to understand.

I have modified the instructions so that they apply for a local repository, rather than one hosted on GitHub.


Splitting a subfolder out into a new repository

  1. Open Git Bash.

  2. Change the current working directory to the location where you want to create your new repository.

  3. Clone the repository that contains the subfolder.

git clone OLD-REPOSITORY-FOLDER NEW-REPOSITORY-FOLDER
  1. Change the current working directory to your cloned repository.

cd REPOSITORY-NAME
  1. To filter out the subfolder from the rest of the files in the repository, run git filter-branch, supplying this information:
    • FOLDER-NAME: The folder within your project that you'd like to create a separate repository from.
      • Tip: Windows users should use / to delimit folders.
    • BRANCH-NAME: The default branch for your current project, for example, master or gh-pages.

git filter-branch --prune-empty --subdirectory-filter FOLDER-NAME  BRANCH-NAME 
# Filter the specified branch in your directory and remove empty commits
Rewrite 48dc599c80e20527ed902928085e7861e6b3cbe6 (89/89)
Ref 'refs/heads/BRANCH-NAME' was rewritten

As I mentioned above, I had to use the reverse solution (deleting all commits not touching my dir/subdir/targetdir) which seemed to work pretty well removing about 95% of the commits (as desired). There are, however, two small issues remaining.

FIRST, filter-branch did a bang up job of removing commits which introduce or modify code but apparently, merge commits are beneath its station in the Gitiverse.

This is a cosmetic issue which I can probably live with (he says...backing away slowly with eyes averted).

SECOND the few commits that remain are pretty much ALL duplicated! I seem to have acquired a second, redundant timeline that spans just about the entire history of the project. The interesting thing (which you can see from the picture below), is that my three local branches are not all on the same timeline (which is, certainly why it exists and isn't just garbage collected).

The only thing I can imagine is that one of the deleted commits was, perhaps, the single merge commit that filter-branch actually did delete, and that created the parallel timeline as each now-unmerged strand took its own copy of the commits. (shrug Where's my TARDiS?) I'm pretty sure I can fix this issue, though I'd really love to understand how it happened.

In the case of crazy mergefest-O-RAMA, I'll likely be leaving that one alone since it has so firmly entrenched itself in my commit history—menacing at me whenever I come near—, it doesn't seem to be actually causing any non-cosmetic problems and because it is quite pretty in Tower.app.


Here is a small modification to CoolAJ86's "The Easy Way™" answer in order to split multiple sub folders (let's say sub1and sub2) into a new git repository.

The Easy Way™ (multiple sub folders)

  1. Prepare the old repo

    pushd <big-repo>
    git filter-branch --tree-filter "mkdir <name-of-folder>; mv <sub1> <sub2> <name-of-folder>/" HEAD
    git subtree split -P <name-of-folder> -b <name-of-new-branch>
    popd
    

    Note: <name-of-folder> must NOT contain leading or trailing characters. For instance, the folder named subproject MUST be passed as subproject, NOT ./subproject/

    Note for windows users: when your folder depth is > 1, <name-of-folder> must have *nix style folder separator (/). For instance, the folder named path1\path2\subproject MUST be passed as path1/path2/subproject. Moreover don't use mvcommand but move.

    Final note: the unique and big difference with the base answer is the second line of the script "git filter-branch..."

  2. Create the new repo

    mkdir <new-repo>
    pushd <new-repo>
    
    git init
    git pull </path/to/big-repo> <name-of-new-branch>
    
  3. Link the new repo to Github or wherever

    git remote add origin <[email protected]:my-user/new-repo.git>
    git push origin -u master
    
  4. Cleanup, if desired

    popd # get out of <new-repo>
    pushd <big-repo>
    
    git rm -rf <name-of-folder>
    

    Note: This leaves all the historical references in the repository.See the Appendix in the original answer if you're actually concerned about having committed a password or you need to decreasing the file size of your .git folder.


To add to Paul's answer, I found that to ultimately recover space, I have to push HEAD to a clean repository and that trims down the size of the .git/objects/pack directory.

i.e.

$ mkdir ...ABC.git
$ cd ...ABC.git
$ git init --bare

After the gc prune, also do:

$ git push ...ABC.git HEAD

Then you can do

$ git clone ...ABC.git

and the size of ABC/.git is reduced

Actually, some of the time consuming steps (e.g. git gc) aren't needed with the push to clean repository, i.e.:

$ git clone --no-hardlinks /XYZ /ABC
$ git filter-branch --subdirectory-filter ABC HEAD
$ git reset --hard
$ git push ...ABC.git HEAD