I had what I believe the same issue is. I found that I needed to adjust the Apache configuration to include a ServerName or ServerAlias for the host.
This code failed:
public class a {
public static void main(String [] a) throws Exception {
java.net.URLConnection c = new java.net.URL("https://mydomain.com/").openConnection();
c.setDoOutput(true);
c.getOutputStream();
}
}
And this code worked:
public class a {
public static void main(String [] a) throws Exception {
java.net.URLConnection c = new java.net.URL("https://google.com/").openConnection();
c.setDoOutput(true);
c.getOutputStream();
}
}
Wireshark revealed that during the TSL/SSL Hello the warning Alert (Level: Warning, Description: Unrecognized Name), Server Hello Was being sent from the server to the client. It was only a warning, however, Java 7.1 then responded immediately back with a "Fatal, Description: Unexpected Message", which I assume means the Java SSL libraries don't like to see the warning of unrecognized name.
From the Wiki on Transport Layer Security (TLS):
112 Unrecognized name warning TLS only; client's Server Name Indicator specified a hostname not supported by the server
This led me to look at my Apache config files and I found that if I added a ServerName or ServerAlias for the name sent from the client/java side, it worked correctly without any errors.
<VirtualHost mydomain.com:443>
ServerName mydomain.com
ServerAlias www.mydomain.com