This is what I did for my app. If you take a look at the following classes in the bootstrap.css file .modal-dialog has a default padding of 10px and @media screen and (min-width: 768px) .modal-dialog has a top padding set to 30px. So in my custom css file I set my top padding to be 15% for all screens without specifying a media screen width. Hope this helps.
.modal-dialog {
padding-top: 15%;
}